EMG Activation Enrichment by MSK Community

Tests whether EMG activation levels differ across MSK community assignments using a Kruskal-Wallis test.

Usage

emgMSKEnrichment(pe, hg = NULL, gamma = 4.3, mapping = NULL)

Arguments

pe

A SummarizedExperiment-like object or numeric signal matrix.

hg

An MSKHypergraph object (NULL loads default).

gamma

Resolution parameter for MSK community detection (default: 4.3).

mapping

Optional data.frame from emgToMSKMapping().

Value

A list with:

per_community

Data frame with community, mean/median activation

overall_test

Kruskal-Wallis test result

activation_values

Named numeric vector of RMS activation